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    "R2",
    "resid",
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      "title": "Neuronal AP Train Data simulated with Hodgkin-Huxley model",
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        "FMM"
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      "title": "Fifth annotated beat (lead MLII) from patient sel100 in 'QT database'",
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    },
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      "title": "Fitting FMM models",
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      ]
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      "title": "FMM Class Representation",
      "topics": [
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      ]
    },
    {
      "page": "FMM-methods",
      "title": "Methods for objects of class ''FMM''",
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        "coef",
        "coef,FMM-method",
        "fitted",
        "fitted,FMM-method",
        "FMM-methods",
        "resid",
        "resid,FMM-method",
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        "summary,FMM-method"
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